SMTL ID : 1v4s.1

Crystal structure of human glucokinase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x GLC: alpha-D-glucopyranose(Non-covalent)

GLC.1: 14 residues within 4Å: Chain A: S.141, F.142, P.143, T.158, K.159, N.194, D.195, I.215, G.219, C.220, N.221, E.246, Q.277, E.280 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:T.158, A:T.158, A:K.159, A:N.194, A:N.194, A:C.220, A:N.221, A:E.246, A:Q.277 Water bridges: A:G.219, A:C.220, A:E.246 Salt bridges: A:K.159

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 4 residues within 4Å: Chain A: M.228, V.231, V.234, G.236 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.231, A:D.237

1 x MRK: 2-AMINO-4-FLUORO-5-[(1-METHYL-1H-IMIDAZOL-2-YL)SULFANYL]-N-(1,3-THIAZOL-2-YL)BENZAMIDE(Non-covalent)

MRK.3: 14 residues within 4Å: Chain A: Y.51, V.52, R.53, S.54, T.55, P.56, M.200, I.201, Y.204, Y.205, C.210, M.225, V.442, V.445 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.52, A:I.201, A:Y.205 Hydrogen bonds: A:R.53, A:R.53, A:T.55, A:Y.205, A:Y.205 Water bridges: A:T.55 pi-Stacking: A:Y.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kamata, K. et al., Structural basis for allosteric regulation of the monomeric allosteric enzyme human glucokinase. Structure (2004)

Release Date

2004-03-30

Peptides

glucokinase isoform 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

glucokinase isoform 2

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