SMTL ID : 1v7v.1

Crystal structure of Vibrio proteolyticus chitobiose phosphorylase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

6 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.186, L.187, N.190, G.196, F.197 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.186, A:L.187, A:N.190, A:G.196, H2O.9 CA.2: 2 residues within 4Å: Chain A: G.791, D.793 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:G.791, A:D.793, H2O.2, H2O.13 CA.3: 1 residues within 4Å: Chain A: E.459 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.459, A:E.459, H2O.16, H2O.17, H2O.26 CA.4: 5 residues within 4Å: Chain B: D.186, L.187, N.190, G.196, F.197 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.186, B:L.187, B:N.190, B:G.196, H2O.35 CA.5: 2 residues within 4Å: Chain B: G.791, D.793 4 PLIP interactions: 2 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:G.791, B:D.793, H2O.28, H2O.39 CA.6: 1 residues within 4Å: Chain B: E.459 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:E.459, B:E.459, H2O.42, H2O.43, H2O.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hidaka, M. et al., Chitobiose phosphorylase from Vibrio proteolyticus, a member of glycosyl transferase family 36, has a clan GH-L-like (alpha/alpha)(6) barrel fold. Structure (2004)

Release Date

2004-06-22

Peptides

chitobiose phosphorylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

chitobiose phosphorylase

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