SMTL ID : 1v93.1

5,10-Methylenetetrahydrofolate Reductase from Thermus thermophilus HB8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 21 residues within 4Å: Chain A: T.49, Y.50, H.77, T.79, L.104, L.106, R.107, G.108, D.109, Y.126, A.127, A.147, Y.149, H.153, E.155, S.156, H.165, K.169, I.178, Q.180, Y.272 31 PLIP interactions: 31 interactions with chain A Hydrophobic interactions: A:L.104, A:L.106, A:A.147, A:I.178 Hydrogen bonds: A:Y.50, A:Y.50, A:R.107, A:R.107, A:R.107, A:G.108, A:D.109, A:A.127, A:Y.149, A:Y.149, A:H.153, A:D.162, A:H.165 Water bridges: A:D.109, A:D.109, A:D.109, A:D.109, A:Y.126, A:Y.126, A:A.128, A:A.147 Salt bridges: A:K.169, A:K.169 pi-Stacking: A:Y.126, A:Y.126, A:H.165, A:H.165

6 x DIO: 1,4-DIETHYLENE DIOXIDE(Non-covalent)

DIO.2: 7 residues within 4Å: Chain A: P.13, L.14, F.15, L.262, V.269, F.271, L.284 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:V.269 DIO.3: 6 residues within 4Å: Chain A: G.82, P.111, R.118, P.119, H.120, P.121 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.82, A:H.120 Water bridges: A:R.118 DIO.4: 5 residues within 4Å: Chain A: F.32, R.59, A.62, W.63, R.66 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.59, A:R.66 Water bridges: A:R.59 DIO.5: 3 residues within 4Å: Chain A: E.160, R.164, A.198 No protein-ligand interaction detected (PLIP) DIO.6: 4 residues within 4Å: Chain A: K.235, H.239, A.245, E.248 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.235 DIO.7: 3 residues within 4Å: Chain A: L.262, E.263, G.265 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nakajima, Y. et al., Crystal Structure of 5,10-Methylenetetrahydrofolate reductase from Thermus thermophilus HB8. To be Published

Release Date

2004-02-03

Peptides

5,10-Methylenetetrahydrofolate reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

5,10-Methylenetetrahydrofolate reductase

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