SMTL ID : 1vb9.1 (1 other biounit)

Crystal structure of Thermoactinomyces vulgaris R-47 alpha-amylase II (TVA II) complexed with transglycosylated product

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x GLC- GLC- GLC- GLC- GLC- GLC: alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-[alpha-D-glucopyranose-(1-6)]alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose

GLC-GLC-GLC-GLC-GLC-GLC.1: 16 residues within 4Å: Chain A: H.202, Y.204, H.244, F.286, A.287, V.290, M.293, R.323, N.325, V.326, E.354, W.356, H.420, D.421, D.465, R.469 1 PLIP interactions: 1 interactions with chain A Water bridges: A:D.465

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 6 residues within 4Å: Chain A: N.143, D.145, N.148, D.149, G.169, D.171 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.145, A:D.149, A:G.169, A:D.171, H2O.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mizuno, M. et al., The crystal structure of Thermoactinomyces vulgaris R-47 alpha-amylase II (TVA II) complexed with transglycosylated product. EUR.J.BIOCHEM. (2004)

Release Date

2005-03-08

Peptides

alpha-amylase II: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

alpha-amylase II

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