SMTL ID : 1vbj.2 (1 other biounit)

The crystal structure of prostaglandin F synthase from Trypanosoma brucei

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 28 residues within 4Å: Chain A: G.26, M.27, W.28, D.52, Y.57, K.82, H.115, S.144, N.145, Q.166, W.192, S.193, P.194, L.195, G.196, Q.197, G.198, V.201, A.218, I.233, P.234, K.235, S.236, G.237, R.241, E.244, N.245 Ligands: CIT.2 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:W.28, A:W.192, A:W.192 Hydrogen bonds: A:M.27, A:W.28, A:D.52, A:S.144, A:S.144, A:N.145, A:Q.166, A:S.193, A:L.195, A:Q.197, A:G.198, A:K.235, A:K.235, A:G.237, A:E.244, A:N.245 Water bridges: A:T.216, A:K.235 Salt bridges: A:K.235, A:R.241 pi-Stacking: A:W.192

1 x CIT: CITRIC ACID(Non-functional Binders)

CIT.2: 11 residues within 4Å: Chain A: W.28, I.56, Y.57, W.84, H.115, W.116, W.192, G.271, P.272, F.277 Ligands: NAP.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:W.116, A:F.277 Hydrogen bonds: A:Y.57, A:W.116 Salt bridges: A:H.115

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Inoue, T., The crystal structure of prostaglandin F synthase from Trypanosoma brucei. TO BE PUBLISHED

Release Date

2005-04-12

Peptides

prostaglandin F synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

prostaglandin F synthase

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