SMTL ID : 1vcr.1

An icosahedral assembly of light-harvesting chlorophyll a/b protein complex from pea thylakoid membranes

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 9.50 Å

Oligo State

monomer

Ligands

7 x CLA: CHLOROPHYLL A(Non-covalent)(Non-functional Binders)

CLA.1: 3 residues within 4Å: Chain A: R.70, L.176, E.180 3 PLIP interactions: 3 interactions with chain A, Hydrophobic interactions: A:R.70, A:L.176, A:E.180 CLA.2: 1 residues within 4Å: Ligands: CHL.9 0 PLIP interactions: CLA.3: 1 residues within 4Å: Chain A: N.208 1 PLIP interactions: 1 interactions with chain A, Hydrophobic interactions: A:N.208 CLA.4: 3 residues within 4Å: Chain A: R.62, E.65, R.185 3 PLIP interactions: 3 interactions with chain A, Hydrophobic interactions: A:R.62, A:E.65, A:R.185 CLA.5: 0 residues within 4Å: (No contacts) 0 PLIP interactions: CLA.6: 0 residues within 4Å: (No contacts) 0 PLIP interactions: CLA.7: 1 residues within 4Å: Ligands: CHL.12 0 PLIP interactions:

5 x CHL: CHLOROPHYLL B(Non-covalent)(Non-functional Binders)

CHL.8: 3 residues within 4Å: Chain A: V.138, Y.141, R.142 3 PLIP interactions: 3 interactions with chain A, Hydrophobic interactions: A:V.138, A:Y.141, A:R.142 CHL.9: 2 residues within 4Å: Chain A: K.182 Ligands: CLA.2 0 PLIP interactions: CHL.10: 1 residues within 4Å: Chain A: H.212 0 PLIP interactions: CHL.11: 3 residues within 4Å: Chain A: L.64, I.67, E.139 3 PLIP interactions: 3 interactions with chain A, Hydrophobic interactions: A:L.64, A:I.67, A:E.139 CHL.12: 1 residues within 4Å: Ligands: CLA.7 0 PLIP interactions:

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hino, T. et al., An icosahedral assembly of the light-harvesting chlorophyll a/b protein complex from pea chloroplast thylakoid membranes. Acta Crystallogr.,Sect.D (2004)

Release Date

2004-03-30

Peptides

Chlorophyll a-b binding protein AB80: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Chlorophyll a-b binding protein AB80