SMTL ID : 1vfh.1

Crystal structure of alanine racemase from D-cycloserine producing Streptomyces lavendulae

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)

PLP.1: 15 residues within 4Å: Chain A: V.36, K.38, Y.42, W.84, R.136, W.166, H.168, N.208, S.209, P.210, R.224, T.225, G.226, L.227, Y.361 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:K.38, A:W.166 Hydrogen bonds: A:Y.42, A:W.84, A:R.136, A:S.209, A:R.224, A:G.226, A:L.227, A:Y.361 Water bridges: A:R.136, A:N.208, A:N.208 pi-Cation interactions: A:H.168 PLP.2: 15 residues within 4Å: Chain B: V.36, K.38, Y.42, W.84, R.136, W.166, H.168, N.208, S.209, P.210, R.224, T.225, G.226, L.227, Y.361 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:K.38, B:W.166 Hydrogen bonds: B:Y.42, B:Y.42, B:W.84, B:R.136, B:S.209, B:R.224, B:G.226, B:L.227 Water bridges: B:R.136, B:N.208, B:N.208 pi-Cation interactions: B:H.168

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Noda, M. et al., Structural evidence that alanine racemase from a D-cycloserine-producing microorganism exhibits resistance to its own product. J.Biol.Chem. (2004)

Release Date

2004-09-14

Peptides

alanine racemase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

alanine racemase

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