SMTL ID : 1vfx.1

Crystal Structure of the Kif1A Motor Domain Complexed With ADP-Mg-AlFx

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: S.104, D.248 Ligands: AF3.2, ADP.5 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:S.104

1 x AF3: ALUMINUM FLUORIDE(Non-covalent)

AF3.2: 8 residues within 4Å: Chain A: T.99, K.103, S.104, T.213, S.215, D.248 Ligands: MG.1, ADP.5 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:S.215

2 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.3: 1 residues within 4Å: Chain A: R.18 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.18, A:R.18 TRS.4: 2 residues within 4Å: Chain A: S.33, T.34 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.31, A:S.33, A:S.33

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.5: 15 residues within 4Å: Chain A: R.11, R.13, P.14, S.58, Y.67, Q.98, T.99, G.100, A.101, G.102, K.103, S.104, Y.105 Ligands: MG.1, AF3.2 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:Y.67, A:Y.67, A:G.100, A:A.101, A:G.102, A:K.103, A:S.104, A:Y.105 Water bridges: A:K.110 Salt bridges: A:K.103 pi-Stacking: A:Y.105, A:Y.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nitta, R. et al., KIF1A Alternately Uses Two Loops to Bind Microtubules. Science (2004)

Release Date

2004-08-10

Peptides

PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C and A HIS TAG: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C and A HIS TAG

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