SMTL ID : 1vi0.1

Crystal structure of a transcriptional regulator

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

1 x DCC: DODECYL-COA(Non-covalent)

DCC.1: 26 residues within 4Å: Chain A: F.60, K.63, M.64, H.92, L.95, T.106, R.111, R.118, N.122, L.125, K.126, L.129, R.152, L.153, R.155, Q.156, F.159, D.163 Chain B: E.164, T.167, T.168, M.171, N.172, K.175, Y.176, L.181 27 PLIP interactions: 8 interactions with chain B, 19 interactions with chain A Hydrogen bonds: B:E.164, B:T.168, B:N.172, A:R.118, A:N.122, A:R.152, A:Q.156, A:Q.156 Water bridges: B:T.168, B:W.169, A:R.111, A:R.155, A:R.155 Salt bridges: B:K.175, A:K.126, A:K.126, A:R.155 pi-Stacking: B:Y.176, B:Y.176 Hydrophobic interactions: A:F.60, A:K.63, A:L.95, A:N.122, A:L.125, A:K.126, A:L.129 pi-Cation interactions: A:R.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Badger, J. et al., Structural analysis of a set of proteins resulting from a bacterial genomics project. Proteins (2005)

Release Date

2003-12-30

Peptides

transcriptional regulator: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

transcriptional regulator