SMTL ID : 1vi9.2 (1 other biounit)

Crystal structure of pyridoxamine kinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: V.222, G.223, V.224, G.225, D.226 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.223, A:V.224, A:G.225, A:D.226 SO4.2: 6 residues within 4Å: Chain B: P.221, G.223, V.224, G.225, D.226 Ligands: BME.3 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:G.223, B:V.224, B:G.225, B:D.226 Water bridges: B:K.184, B:G.225, B:D.226

1 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.3: 6 residues within 4Å: Chain B: Y.85, V.116, C.124, V.222, D.226 Ligands: SO4.2 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.226

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Badger, J. et al., Structural analysis of a set of proteins resulting from a bacterial genomics project. Proteins (2005)

Release Date

2003-12-30

Peptides

Pyridoxamine kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Pyridoxamine kinase

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