SMTL ID : 1vje.1

Crystal structure of a autoinducer-2 synthesis protein with bound selenomethionine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.64 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.57, H.61, C.125, H.131 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.57, A:H.61, A:C.125, H2O.10 ZN.4: 4 residues within 4Å: Chain B: H.57, H.61, C.125, H.131 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.57, B:H.61, B:C.125, H2O.5

2 x MSE: SELENOMETHIONINE(Non-functional Binders)

MSE.2: 10 residues within 4Å: Chain A: S.9, F.10, K.38, Y.87 Chain B: E.60, A.64, R.68, D.76, V.77, S.78 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:D.76, B:V.77 Salt bridges: B:R.68, A:K.38 MSE.3: 12 residues within 4Å: Chain A: E.60, H.61, A.64, R.68, D.76, V.77, S.78 Chain B: V.7, S.9, F.10, K.38, Y.87 7 PLIP interactions: 5 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:D.76, A:D.76, A:V.77 Water bridges: A:E.60, B:K.38 Salt bridges: A:R.68, B:K.38

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lewis, H.A. et al., A Structural Genomics Approach to the Study of Quorum Sensing: Crystal Structures of Three LuxS Orthologs. Structure (2001)

Release Date

2004-02-10

Peptides

Autoinducer-2 production protein LuxS: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Autoinducer-2 production protein LuxS

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