SMTL ID : 1vk9.1 (1 other biounit)

CRYSTAL STRUCTURE OF A DUF1893 family protein (TM1506) FROM THERMOTOGA MARITIMA AT 2.70 A RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain A: E.102, D.135 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.102, A:E.102 ZN.2: 1 residues within 4Å: Chain A: D.4 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.4, A:D.4 ZN.3: 3 residues within 4Å: Chain A: H.8, H.10, E.62 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.8, A:H.10, A:E.62 ZN.4: 2 residues within 4Å: Chain A: H.88, D.110 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.88, A:D.110, A:D.110, H2O.1, H2O.1 ZN.5: 1 residues within 4Å: Chain A: D.136 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.136, H2O.1 ZN.6: 1 residues within 4Å: Chain A: H.7 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.7

1 x UNL: UNKNOWN LIGAND

UNL.7: 22 residues within 4Å: Chain A: S.31, L.32, S.46, G.47, L.48, P.50, V.51, D.68, K.69, M.70, G.72, K.73, A.74, A.75, V.91, E.111, V.116, G.118, C.125, P.126, F.127, E.128 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:S.31, A:S.31, A:D.45, A:S.46, A:S.46, A:G.47, A:L.48, A:D.68, A:K.69, A:G.72, A:A.74, A:A.75, A:E.128, A:E.128

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, Q. et al., Crystal structure of an ADP-ribosylated protein with a cytidine deaminase-like fold, but unknown function (TM1506), from Thermotoga maritima at 2.70 A resolution. Proteins (2008)

Release Date

2004-05-18

Peptides

conserved hypothetical protein TM1506: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

conserved hypothetical protein TM1506

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