SMTL ID : 1vl7.1

Crystal structure of a putative heme oxygenase (alr5027) from nostoc sp. pcc 7120 at 1.50 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: R.98, G.156, A.157 Chain B: Y.48, A.49, P.50, H.69 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:Y.48, A:G.156 Water bridges: B:S.47 EDO.2: 9 residues within 4Å: Chain A: F.30, S.32, A.33, I.34, L.82, F.83, V.84 Chain B: E.87, R.96 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:S.32, A:L.82, A:V.84, B:R.96, B:R.96 EDO.3: 6 residues within 4Å: Chain A: I.73, E.74, P.77, A.105, L.107, F.142 1 PLIP interactions: 1 interactions with chain A Water bridges: A:L.107 EDO.4: 7 residues within 4Å: Chain A: Y.48, A.49, P.50, H.69 Chain B: R.98, G.156, A.157 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:Y.48, B:R.98, B:G.156, B:A.157 Water bridges: A:S.47 EDO.5: 6 residues within 4Å: Chain B: I.73, E.74, P.77, A.105, L.107, F.142 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:I.73 EDO.6: 5 residues within 4Å: Chain B: Q.28, F.51, V.52, I.53, R.125 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:I.53 Water bridges: B:Q.121 EDO.7: 9 residues within 4Å: Chain A: E.87, R.96 Chain B: F.30, S.32, A.33, I.34, L.82, F.83, V.84 7 PLIP interactions: 4 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:S.32, B:I.34, B:L.82, B:V.84, A:E.87, A:R.96, A:R.96 EDO.8: 3 residues within 4Å: Chain A: I.43 Chain B: D.102, K.147 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of hypothetical protein (alr5027) from Nostoc sp. at 1.50 A resolution. To be published

Release Date

2004-08-17

Peptides

hypothetical protein alr5027: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

hypothetical protein alr5027