SMTL ID : 1vp9.1

DC26 MUTANT OF VACCINIA VIRUS PROTEIN VP39 IN COMPLEX WITH S-ADENOSYLHOMOCYSTEINE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-dimer

Ligands

2 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 21 residues within 4Å: Chain A: Q.54, L.57, Y.81, I.82, G.83, S.84, A.85, P.86, G.87, H.89, I.90, I.109, D.110, G.111, R.112, R.129, F.130, V.131, D.153, V.154, R.155 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:Q.54, A:Y.81, A:G.83, A:G.83, A:A.85, A:A.85, A:G.87, A:G.111, A:R.112, A:V.131, A:V.131, A:D.153, A:R.155 Salt bridges: A:H.89 pi-Stacking: A:F.130, A:F.130 SAH.2: 21 residues within 4Å: Chain B: Q.54, L.57, Y.81, I.82, G.83, S.84, A.85, P.86, G.87, H.89, I.90, I.109, D.110, G.111, R.112, R.129, F.130, V.131, D.153, V.154, R.155 14 PLIP interactions: 14 interactions with chain B Hydrogen bonds: B:Q.54, B:G.83, B:G.83, B:A.85, B:A.85, B:G.87, B:G.111, B:R.112, B:V.131, B:V.131, B:R.155 Salt bridges: B:H.89 pi-Stacking: B:F.130, B:F.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hodel, A.E. et al., Specific protein recognition of an mRNA cap through its alkylated base. Nat.Struct.Biol. (1997)

Release Date

1997-09-17

Peptides

VP39: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

VP39

Related Entries With Identical Sequence