SMTL ID : 1vpe.1

CRYSTALLOGRAPHIC ANALYSIS OF PHOSPHOGLYCERATE KINASE FROM THE HYPERTHERMOPHILIC BACTERIUM THERMOTOGA MARITIMA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: D.354 Ligands: ANP.2 No protein-ligand interaction detected (PLIP)

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.2: 24 residues within 4Å: Chain A: G.194, A.195, K.196, K.200, G.218, A.219, F.222, G.292, L.293, N.316, G.317, P.318, M.319, G.320, V.321, E.323, G.352, G.353, D.354, S.355, T.373, G.375, G.376 Ligands: MG.1 21 PLIP interactions: 21 interactions with chain A Hydrogen bonds: A:A.195, A:K.196, A:K.196, A:K.200, A:G.292, A:N.316, A:N.316, A:G.317, A:F.322, A:E.323, A:G.352, A:G.353, A:D.354, A:D.354, A:D.354, A:S.355, A:T.373, A:G.375 Water bridges: A:K.196, A:G.376 Salt bridges: A:K.200

1 x 3PG: 3-PHOSPHOGLYCERIC ACID(Non-covalent)

3PG.3: 11 residues within 4Å: Chain A: D.20, N.22, R.35, H.58, R.61, R.117, G.146, T.147, H.149, R.150, K.196 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:D.20, A:N.22, A:R.35, A:G.146 Water bridges: A:G.60, A:R.150, A:K.196, A:G.376 Salt bridges: A:R.35, A:H.58, A:R.61, A:R.117, A:R.150, A:K.196, A:K.196

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Auerbach, G. et al., Closed structure of phosphoglycerate kinase from Thermotoga maritima reveals the catalytic mechanism and determinants of thermal stability. Structure (1997)

Release Date

1998-06-17

Peptides

PHOSPHOGLYCERATE KINASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PHOSPHOGLYCERATE KINASE