SMTL ID : 1vqt.1

Crystal structure of Orotidine 5'-phosphate decarboxylase (TM0332) from Thermotoga maritima at 2.00 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

18 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 4 residues within 4Å: Chain A: K.48, K.49, D.52, H.83 Ligand excluded by PLIP EDO.2: 1 residues within 4Å: Chain A: V.176 Ligand excluded by PLIP EDO.3: 7 residues within 4Å: Chain A: K.38, D.64, K.66, V.142, L.160, P.162 Ligands: EDO.8 Ligand excluded by PLIP EDO.4: 4 residues within 4Å: Chain A: A.55, L.59, P.84, A.85 Ligand excluded by PLIP EDO.5: 2 residues within 4Å: Chain A: H.11, H.12 Ligand excluded by PLIP EDO.6: 3 residues within 4Å: Chain A: T.178, E.180, E.181 Ligand excluded by PLIP EDO.7: 5 residues within 4Å: Chain A: S.72, T.73, R.76 Chain B: R.193 Ligands: EDO.9 Ligand excluded by PLIP EDO.8: 5 residues within 4Å: Chain A: S.18, D.20, K.38, P.162 Ligands: EDO.3 Ligand excluded by PLIP EDO.9: 4 residues within 4Å: Chain A: R.76 Chain B: D.20, N.42 Ligands: EDO.7 Ligand excluded by PLIP EDO.10: 4 residues within 4Å: Chain B: K.48, K.49, D.52, H.83 Ligand excluded by PLIP EDO.11: 1 residues within 4Å: Chain B: V.176 Ligand excluded by PLIP EDO.12: 7 residues within 4Å: Chain B: K.38, D.64, K.66, V.142, L.160, P.162 Ligands: EDO.17 Ligand excluded by PLIP EDO.13: 4 residues within 4Å: Chain B: A.55, L.59, P.84, A.85 Ligand excluded by PLIP EDO.14: 2 residues within 4Å: Chain B: H.11, H.12 Ligand excluded by PLIP EDO.15: 3 residues within 4Å: Chain B: T.178, E.180, E.181 Ligand excluded by PLIP EDO.16: 5 residues within 4Å: Chain A: R.193 Chain B: S.72, T.73, R.76 Ligands: EDO.18 Ligand excluded by PLIP EDO.17: 5 residues within 4Å: Chain B: S.18, D.20, K.38, P.162 Ligands: EDO.12 Ligand excluded by PLIP EDO.18: 4 residues within 4Å: Chain A: D.20, N.42 Chain B: R.76 Ligands: EDO.16 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of Orotidine 5'-phosphate decarboxylase (TM0332) from Thermotoga maritima at 2.00 A resolution. To be published

Release Date

2005-01-18

Peptides

Orotidine 5'-phosphate decarboxylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Orotidine 5'-phosphate decarboxylase