SMTL ID : 1vqw.1

Crystal structure of a protein with similarity to flavin-containing monooxygenases and to mammalian dimethylalanine monooxygenases

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 28 residues within 4Å: Chain A: G.15, A.16, G.17, P.18, S.19, G.20, E.40, R.41, R.42, G.47, V.48, W.49, P.85, L.86, L.90, T.92, N.93, T.94, T.138, D.139, V.140, C.174, N.175, G.176, Y.178, F.298, P.344, F.345 25 PLIP interactions: 25 interactions with chain A Hydrophobic interactions: A:P.85, A:L.86, A:L.90 Hydrogen bonds: A:A.16, A:S.19, A:S.19, A:G.20, A:R.41, A:R.41, A:R.42, A:W.49, A:N.93, A:N.93, A:T.94, A:T.94, A:V.140, A:V.140 Water bridges: A:A.16, A:G.47, A:N.175, A:G.176 pi-Stacking: A:W.49, A:W.49 pi-Cation interactions: A:R.41, A:R.41 FAD.4: 28 residues within 4Å: Chain B: G.15, A.16, G.17, P.18, S.19, G.20, E.40, R.41, R.42, G.47, V.48, W.49, P.85, L.86, L.90, T.92, N.93, T.94, T.138, D.139, V.140, C.174, N.175, G.176, Y.178, F.298, P.344, F.345 26 PLIP interactions: 26 interactions with chain B Hydrophobic interactions: B:P.85, B:L.86, B:L.90 Hydrogen bonds: B:A.16, B:S.19, B:S.19, B:G.20, B:R.41, B:R.41, B:R.42, B:W.49, B:N.93, B:N.93, B:T.94, B:D.139, B:V.140, B:V.140 Water bridges: B:A.16, B:S.19, B:G.47, B:N.175, B:F.345 pi-Stacking: B:W.49, B:W.49 pi-Cation interactions: B:R.41, B:R.41

2 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.2: 10 residues within 4Å: Chain A: Y.51, R.88, R.116, H.117, E.208 Chain B: S.44, N.50, Y.51, T.52, Q.120 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:N.50, B:Q.120, A:Y.51, A:R.116, A:R.116 Water bridges: B:G.43 EPE.3: 10 residues within 4Å: Chain A: S.44, N.50, Y.51, T.52, Q.120 Chain B: Y.51, R.88, R.116, H.117, E.208 7 PLIP interactions: 3 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:N.50, A:Q.120, B:Y.51, B:Y.51, B:R.116, B:R.116 Water bridges: A:G.43

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eswaramoorthy, S. et al., Mechanism of action of a flavin-containing monooxygenase. Proc.Natl.Acad.Sci.Usa (2006)

Release Date

2005-01-11

Peptides

PROTEIN WITH SIMILARITY TO FLAVIN-CONTAINING MONOOXYGENASES AND TO MAMMALIAN DIMETHYLALANINE MONOOXYGENASES: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PROTEIN WITH SIMILARITY TO FLAVIN-CONTAINING MONOOXYGENASES AND TO MAMMALIAN DIMETHYLALANINE MONOOXYGENASES