SMTL ID : 1vrm.1

Crystal structure of the apbe protein (tm1553) from thermotoga maritima msb8 at 1.58 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.58 Å

Oligo State

monomer

Ligands

1 x UNL: UNKNOWN LIGAND

UNL.1: 20 residues within 4Å: Chain A: A.102, F.103, D.104, V.107, L.111, D.161, G.163, G.164, D.194, A.231, T.232, S.233, E.237, H.249, I.250, L.251, P.253, D.276, S.279, T.280 28 PLIP interactions: 28 interactions with chain A Hydrogen bonds: A:A.102, A:D.104, A:D.104, A:D.161, A:G.163, A:G.164, A:G.164, A:T.232, A:T.232, A:H.249, A:H.249, A:L.251, A:L.251, A:D.276, A:S.279, A:T.280, A:T.280, A:T.280 Water bridges: A:D.161, A:G.163, A:K.167, A:K.167, A:K.167, A:K.167, A:K.167, A:E.237, A:T.280, A:T.280

1 x MRD: (4R)-2-METHYLPENTANE-2,4-DIOL(Non-functional Binders)

MRD.2: 3 residues within 4Å: Chain A: R.109, E.112, K.159 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.109, A:R.109, A:E.112

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.3: 5 residues within 4Å: Chain A: A.47, E.50, D.51, R.54, I.177 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:I.177 Hydrogen bonds: A:E.50, A:E.50 MPD.4: 6 residues within 4Å: Chain A: R.31, F.188, E.190, W.207, V.208, I.209 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.188, A:I.209 Hydrogen bonds: A:V.208, A:V.208 Water bridges: A:G.210

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Han, G.W. et al., Crystal structure of the ApbE protein (TM1553) from Thermotoga maritima at 1.58 A resolution. Proteins (2006)

Release Date

2005-03-22

Peptides

hypothetical protein TM1553: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

hypothetical protein TM1553