SMTL ID : 1w10.1

Urokinase type plasminogen activator

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x SJ1: N-(ISOBUTOXYCARBONYL)-D-SERYL-N-((1S)-4-{[AMINO(IMINO)METHYL]AMINO}-1-FORMYLBUTYL)-L-ALANINAMIDE(Covalent)

SJ1.1: 17 residues within 4Å: Chain A: H.46, L.92, H.94, D.192, S.193, C.194, Q.195, S.198, V.216, S.217, W.218, G.219, R.220, G.221, C.222, G.229 Ligands: SO4.3 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:V.216 Hydrogen bonds: A:L.92, A:S.193, A:S.193, A:Q.195, A:S.217, A:G.219, A:G.219, A:R.220, A:G.221, A:G.221 Water bridges: A:H.94, A:S.198, A:A.223, A:V.230 Salt bridges: A:D.192

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: H.95, N.96, T.178, K.180, M.181 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.96, A:T.178 Salt bridges: A:H.95, A:K.180 SO4.3: 5 residues within 4Å: Chain A: V.30, Y.150, Q.195, G.196 Ligands: SJ1.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.150, A:Y.150, A:G.196 Water bridges: A:S.198

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zeslawska, E. et al., Crystals of urokinase type plasminogen activator complexes reveal the binding mode of peptidomimetic inhibitors. J.Mol.Biol. (2003)

Release Date

2008-05-20

Peptides

UROKINASE-TYPE PLASMINOGEN ACTIVATOR: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
U

UROKINASE-TYPE PLASMINOGEN ACTIVATOR

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