SMTL ID : 1w13.1

UROKINASE TYPE PLASMINOGEN ACTIVATOR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x SM1: N-(BENZYLSULFONYL)-D-SERYL-N-(4-{[AMINO(IMINO)METHYL]AMINO}BENZYL)-L-ALANINAMIDE(Non-covalent)

SM1.1: 19 residues within 4Å: Chain A: H.46, L.92, H.94, D.192, S.193, C.194, Q.195, S.198, V.216, S.217, W.218, G.219, R.220, G.221, C.222, K.227, P.228, G.229 Ligands: SO4.3 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:V.216 Hydrogen bonds: A:L.92, A:S.193, A:S.193, A:S.217, A:G.219, A:G.219, A:G.221, A:G.221 Water bridges: A:H.94 Salt bridges: A:D.192

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: H.95, N.96, T.178, K.180, M.181 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.96, A:T.178 Water bridges: A:N.96, A:K.180 Salt bridges: A:H.95, A:K.180 SO4.3: 7 residues within 4Å: Chain A: V.30, H.46, Q.195, G.196, D.197, S.198 Ligands: SM1.1 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:V.30, A:G.196, A:D.197, A:S.198, A:S.198 Salt bridges: A:H.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zeslawska, E. et al., Crystals of Urokinase Type Plasminogen Activator Complexes Reveal the Binding Mode of Peptidomimetic Inhibitors. J.Mol.Biol. (2003)

Release Date

2008-05-20

Peptides

UROKINASE-TYPE PLASMINOGEN ACTIVATOR: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
U

UROKINASE-TYPE PLASMINOGEN ACTIVATOR

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