SMTL ID : 1w16.1

rat synaptotagmin 4 C2B domain in the absence of calcium

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain A: S.67, V.87, F.88, D.89 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.67, A:V.87, A:D.89 Water bridges: A:K.69 NA.2: 3 residues within 4Å: Chain A: E.108, S.111, N.113 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.108, A:S.111, A:S.111, A:N.113 Water bridges: A:G.110, A:N.113

7 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 1 residues within 4Å: Chain A: N.83 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain A: K.146, W.147 Ligand excluded by PLIP CL.5: 2 residues within 4Å: Chain A: Y.54, K.56 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain A: K.69, F.86, V.87 Ligand excluded by PLIP CL.7: 3 residues within 4Å: Chain A: K.56, N.58, R.65 Ligand excluded by PLIP CL.8: 3 residues within 4Å: Chain A: K.56, R.65, K.68 Ligand excluded by PLIP CL.9: 2 residues within 4Å: Chain A: R.40, H.41 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dai, H. et al., Structural Basis for the Evolutionary Inactivation of Ca2+ Binding to Synaptotagmin 4. Nat.Struct.Mol.Biol. (2004)

Release Date

2004-08-13

Peptides

SYNAPTOTAGMIN IV: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SYNAPTOTAGMIN IV

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