SMTL ID : 1w9s.2 (1 other biounit)

Structure of a beta-1,3-glucan binding CBM6 from Bacillus halodurans

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.59 Å

Oligo State

monomer

Ligands

3 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain A: Q.16, E.18, D.38, N.134 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.38, A:N.134 Water bridges: A:Q.16 NA.2: 5 residues within 4Å: Chain A: G.25, W.42, I.43, N.44, D.47 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:W.42, A:N.44 NA.3: 1 residues within 4Å: Chain A: D.90 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.90, A:D.90 Water bridges: A:N.108

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 6 residues within 4Å: Chain A: E.29, G.41, W.42, W.99, D.129, N.132 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:E.29, A:W.42, A:D.129, A:N.132, A:N.132 Water bridges: A:I.43, A:Q.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Van Bueren, A.L. et al., Family 6 Carbohydrate Binding Modules Recognize the Non-Reducing End of Beta-1,3-Linked Glucans by Presenting a Unique Ligand Binding Surface. J.Biol.Chem. (2005)

Release Date

2004-11-03

Peptides

BH0236 PROTEIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

BH0236 PROTEIN

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