SMTL ID : 1waa.1

IG27 protein domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-4-1-1-mer

Ligands

24 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain A: H.24 Chain E: H.24 4 PLIP interactions: 1 interactions with chain E, 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: E:H.24, A:H.24, H2O.4, H2O.4 ZN.2: 4 residues within 4Å: Chain A: E.52, H.65 Chain E: E.26, K.59 5 PLIP interactions: 2 interactions with chain E, 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: E:E.26, E:E.26, A:E.52, A:H.65, H2O.4 ZN.3: 3 residues within 4Å: Chain A: D.33 Chain B: D.33 Chain F: D.33 5 PLIP interactions: 2 interactions with chain A, 1 interactions with chain F, 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: A:D.33, A:D.33, F:D.33, B:D.33, H2O.4 ZN.4: 2 residues within 4Å: Chain A: H.35 Chain B: D.56 5 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: B:D.56, B:D.56, A:H.35, H2O.4, H2O.4 ZN.5: 1 residues within 4Å: Chain A: E.92 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.92, H2O.4, H2O.5 ZN.6: 4 residues within 4Å: Chain B: E.52, H.65 Chain D: E.26, K.59 5 PLIP interactions: 3 interactions with chain B, 1 interactions with chain D, 1 Ligand-Water interactions Metal complexes: B:E.52, B:E.52, B:H.65, D:E.26, H2O.8 ZN.7: 2 residues within 4Å: Chain B: H.35 Chain C: E.55 5 PLIP interactions: 1 interactions with chain B, 1 interactions with chain C, 3 Ligand-Water interactions Metal complexes: B:H.35, C:E.55, H2O.8, H2O.8, H2O.8 ZN.8: 1 residues within 4Å: Chain B: E.7 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.7, B:E.7, H2O.8 ZN.9: 2 residues within 4Å: Chain B: H.24 Chain D: H.24 4 PLIP interactions: 1 interactions with chain D, 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: D:H.24, B:H.24, H2O.8, H2O.8 ZN.10: 3 residues within 4Å: Chain A: A.2 Chain B: E.7, E.9 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:E.9, B:E.9, H2O.8, H2O.8, H2O.8 ZN.11: 4 residues within 4Å: Chain C: E.52, H.65 Chain F: E.26, K.59 5 PLIP interactions: 3 interactions with chain C, 1 interactions with chain F, 1 Ligand-Water interactions Metal complexes: C:E.52, C:E.52, C:H.65, F:E.26, H2O.11 ZN.12: 3 residues within 4Å: Chain C: D.33 Chain D: D.33 Chain E: D.33 5 PLIP interactions: 2 interactions with chain C, 1 interactions with chain D, 1 interactions with chain E, 1 Ligand-Water interactions Metal complexes: C:D.33, C:D.33, D:D.33, E:D.33, H2O.11 ZN.13: 2 residues within 4Å: Chain C: H.35 Chain D: D.56 5 PLIP interactions: 2 interactions with chain D, 1 interactions with chain C, 2 Ligand-Water interactions Metal complexes: D:D.56, D:D.56, C:H.35, H2O.11, H2O.11 ZN.14: 3 residues within 4Å: Chain C: D.56 Chain F: E.55 Ligands: ZN.20 5 PLIP interactions: 1 interactions with chain F, 2 interactions with chain C, 2 Ligand-Water interactions Metal complexes: F:E.55, C:D.56, C:D.56, H2O.11, H2O.16 ZN.15: 3 residues within 4Å: Chain C: E.31 Chain D: E.31 Chain E: E.31 No protein-ligand interaction detected (PLIP) ZN.16: 4 residues within 4Å: Chain B: E.26, K.59 Chain D: E.52, H.65 5 PLIP interactions: 3 interactions with chain D, 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: D:E.52, D:E.52, D:H.65, B:E.26, H2O.13 ZN.17: 3 residues within 4Å: Chain A: E.55 Chain D: H.35 Chain E: E.56 5 PLIP interactions: 1 interactions with chain D, 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: D:H.35, A:E.55, H2O.14, H2O.14, H2O.14 ZN.18: 1 residues within 4Å: Chain D: E.7 2 PLIP interactions: 2 interactions with chain D Metal complexes: D:E.7, D:E.7 ZN.19: 3 residues within 4Å: Chain A: E.26 Chain E: E.52, H.65 5 PLIP interactions: 3 interactions with chain E, 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: E:E.52, E:E.52, E:H.65, A:E.26, H2O.16 ZN.20: 3 residues within 4Å: Chain E: H.35 Chain F: E.55 Ligands: ZN.14 5 PLIP interactions: 1 interactions with chain E, 1 interactions with chain F, 3 Ligand-Water interactions Metal complexes: E:H.35, F:E.55, H2O.16, H2O.16, H2O.16 ZN.21: 2 residues within 4Å: Chain C: E.9 Chain E: G.1 4 PLIP interactions: 1 interactions with chain E, 1 interactions with chain C, 2 Ligand-Water interactions Metal complexes: E:G.1, C:E.9, H2O.16, H2O.16 ZN.22: 2 residues within 4Å: Chain C: H.24 Chain F: H.24 4 PLIP interactions: 1 interactions with chain F, 1 interactions with chain C, 2 Ligand-Water interactions Metal complexes: F:H.24, C:H.24, H2O.19, H2O.19 ZN.23: 4 residues within 4Å: Chain C: E.26, K.59 Chain F: E.52, H.65 5 PLIP interactions: 2 interactions with chain F, 2 interactions with chain C, 1 Ligand-Water interactions Metal complexes: F:E.52, F:H.65, C:E.26, C:E.26, H2O.19 ZN.24: 2 residues within 4Å: Chain A: D.56 Chain F: H.35 4 PLIP interactions: 1 interactions with chain F, 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: F:H.35, A:D.56, A:D.56, H2O.19

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stacklies, W. et al., Mechanical Network in Titin Immunoglobulin from Force Distribution Analysis. Plos Comput.Biol. (2009)

Release Date

2006-07-05

Peptides

TITIN: ABCD
TITIN: E
TITIN: F

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

TITIN

TITIN

TITIN