SMTL ID : 1wky.1

Crystal structure of alkaline mannanase from Bacillus sp. strain JAMB-602: catalytic domain and its Carbohydrate Binding Module

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: L.217, N.218, R.249 Ligand excluded by PLIP CL.2: 2 residues within 4Å: Chain A: Q.248, R.249 Ligand excluded by PLIP

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 5 residues within 4Å: Chain A: D.319, E.321, K.345, H.348, D.459 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.319, A:D.319, A:E.321, A:H.348, A:D.459

2 x NA: SODIUM ION(Non-functional Binders)

NA.4: 4 residues within 4Å: Chain A: H.230, D.236, V.237, E.239 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.237, A:E.239 NA.5: 4 residues within 4Å: Chain A: G.1, E.132, Y.199, E.227 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.1, A:E.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Akita, M. et al., Crystallization and preliminary X-ray study of alkaline mannanase from an alkaliphilic Bacillus isolate. Acta Crystallogr.,Sect.D (2004)

Release Date

2005-06-15

Peptides

endo-beta-1,4-Mannanase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

endo-beta-1,4-Mannanase