SMTL ID : 1wlj.1

human ISG20

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

3 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 6 residues within 4Å: Chain A: D.11, C.12, E.13, D.154 Ligands: MN.2, U5P.5 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:D.11, A:E.13, A:D.154, U5P.5 MN.2: 3 residues within 4Å: Chain A: D.11 Ligands: MN.1, U5P.5 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.11, H2O.2, H2O.2, H2O.2, H2O.2 MN.3: 2 residues within 4Å: Chain A: D.90, H.93 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.90, A:H.93

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.4: 5 residues within 4Å: Chain A: I.107, Y.108, D.109, T.112, D.113 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.108 Hydrogen bonds: A:I.107, A:D.109, A:T.112

1 x U5P: URIDINE-5'-MONOPHOSPHATE(Non-covalent)

U5P.5: 12 residues within 4Å: Chain A: D.11, C.12, E.13, M.14, R.53, V.56, S.57, Q.143, H.149, D.154 Ligands: MN.1, MN.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.56 Hydrogen bonds: A:M.14, A:R.53, A:R.53 Water bridges: A:C.12, A:Q.143 Salt bridges: A:H.149

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Horio, T. et al., Crystal structure of human ISG20, an interferon-induced antiviral ribonuclease. Febs Lett. (2004)

Release Date

2004-12-21

Peptides

interferon stimulated gene 20kDa: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

interferon stimulated gene 20kDa