SMTL ID : 1wnz.1

Isoleucyl-tRNA synthetase editing domain complexed with the post-transfer editing substrate analogue, Val-2AA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x 2VA: 2'-(L-VALYL)AMINO-2'-DEOXYADENOSINE(Non-covalent)

2VA.1: 15 residues within 4Å: Chain A: W.28, T.29, T.30, T.31, T.34, Y.109, V.110, S.111, D.114, G.117, V.119, H.120, A.122, F.125, D.129 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:A.122, A:F.125 Hydrogen bonds: A:T.29, A:T.30, A:S.111, A:S.111, A:G.117, A:H.120, A:H.120 Water bridges: A:D.114, A:D.114, A:T.116

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fukunaga, R. et al., Structural basis for substrate recognition by the editing domain of isoleucyl-tRNA synthetase. J.Mol.Biol. (2006)

Release Date

2005-10-25

Peptides

isoleucyl-trna synthetase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

isoleucyl-trna synthetase

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