- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 4 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
NDP.2: 27 residues within 4Å:- Chain A: G.8, L.9, G.10, A.11, M.12, W.29, N.30, R.31, T.32, K.35, C.62, L.63, P.64, E.68, E.71, T.90, S.91, V.116, G.119, T.120, K.165, T.226, F.227, L.231, K.234, D.235
- Ligands: SO4.1
25 PLIP interactions:25 interactions with chain A- Hydrophobic interactions: A:V.116, A:F.227
- Hydrogen bonds: A:L.9, A:A.11, A:M.12, A:N.30, A:N.30, A:R.31, A:T.32, A:T.32, A:L.63, A:E.71, A:S.91, A:S.91, A:T.120, A:T.226, A:K.234
- Water bridges: A:G.10, A:G.13, A:R.31, A:R.31, A:A.228
- Salt bridges: A:R.31, A:K.35
- pi-Cation interactions: A:R.31
NDP.4: 25 residues within 4Å:- Chain B: G.8, L.9, G.10, A.11, M.12, N.30, R.31, T.32, C.62, L.63, P.64, E.68, E.71, T.90, S.91, V.116, G.119, T.120, K.165, T.226, F.227, L.231, K.234, D.235
- Ligands: SO4.3
26 PLIP interactions:26 interactions with chain B- Hydrophobic interactions: B:V.116, B:F.227
- Hydrogen bonds: B:L.9, B:A.11, B:M.12, B:N.30, B:N.30, B:R.31, B:T.32, B:L.63, B:E.71, B:S.91, B:S.91, B:T.120, B:T.226, B:K.234
- Water bridges: B:G.10, B:G.13, B:R.31, B:R.31, B:R.31, B:R.31, B:T.32, B:A.228
- Salt bridges: B:R.31
- pi-Cation interactions: B:R.31
NDP.6: 27 residues within 4Å:- Chain C: G.8, L.9, G.10, A.11, M.12, W.29, N.30, R.31, T.32, K.35, C.62, L.63, P.64, E.68, E.71, T.90, S.91, V.116, G.119, T.120, K.165, T.226, F.227, L.231, K.234, D.235
- Ligands: SO4.5
29 PLIP interactions:29 interactions with chain C- Hydrophobic interactions: C:V.116, C:F.227
- Hydrogen bonds: C:L.9, C:A.11, C:M.12, C:N.30, C:N.30, C:R.31, C:T.32, C:L.63, C:E.71, C:S.91, C:S.91, C:T.120, C:T.226, C:K.234
- Water bridges: C:G.10, C:G.13, C:R.31, C:R.31, C:R.31, C:R.31, C:T.32, C:E.68, C:E.68, C:E.68, C:A.228
- Salt bridges: C:R.31
- pi-Cation interactions: C:R.31
NDP.8: 23 residues within 4Å:- Chain D: G.8, L.9, G.10, A.11, M.12, W.29, N.30, R.31, T.32, C.62, L.63, P.64, E.68, E.71, T.90, S.91, V.116, G.119, K.165, T.226, F.227, K.234
- Ligands: SO4.7
20 PLIP interactions:20 interactions with chain D- Hydrogen bonds: D:L.9, D:A.11, D:M.12, D:N.30, D:N.30, D:T.32, D:T.32, D:L.63, D:E.71, D:S.91, D:S.91, D:K.234, D:K.234
- Water bridges: D:G.13, D:R.31, D:R.31, D:T.120, D:T.226
- Salt bridges: D:R.31
- pi-Cation interactions: D:R.31
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lokanath, N.K. et al., Crystal Structure of Novel NADP-dependent 3-Hydroxyisobutyrate Dehydrogenase from Thermus thermophilus HB8. J.Mol.Biol. (2005)
- Release Date
- 2005-08-30
- Peptides
- 3-hydroxyisobutyrate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 4 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lokanath, N.K. et al., Crystal Structure of Novel NADP-dependent 3-Hydroxyisobutyrate Dehydrogenase from Thermus thermophilus HB8. J.Mol.Biol. (2005)
- Release Date
- 2005-08-30
- Peptides
- 3-hydroxyisobutyrate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D