SMTL ID : 1wrb.3 (2 other biounits)

Crystal structure of the N-terminal RecA-like domain of DjVLGB, a pranarian Vasa-like RNA helicase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 8 residues within 4Å: Chain A: Q.68, T.69, G.70, S.71, G.72, K.73, T.74 Chain B: G.70 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:G.70, A:S.71, A:G.72, A:K.73, A:T.74, A:T.74 Water bridges: A:K.73, A:K.73, A:T.74, A:A.75 Salt bridges: A:K.73 SO4.2: 8 residues within 4Å: Chain A: G.70 Chain B: Q.68, T.69, G.70, S.71, G.72, K.73, T.74 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:Q.68, B:G.70, B:S.71, B:G.72, B:K.73, B:T.74 Water bridges: B:A.75

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kurimoto, K. et al., Crystal structure of the N-terminal RecA-like domain of a DEAD-box RNA helicase, the Dugesia japonica vasa-like gene B protein. J.Struct.Biol. (2005)

Release Date

2005-04-12

Peptides

DjVLGB: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DjVLGB

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