SMTL ID : 1wri.1

Crystal Structure of Ferredoxin isoform II from E. arvense

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)

FES.1: 8 residues within 4Å: Chain A: S.36, C.37, Q.38, G.40, A.41, C.42, C.45, C.75 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.37, A:C.42, A:C.45, A:C.75

7 x BEN: BENZAMIDINE(Non-functional Binders)

BEN.2: 7 residues within 4Å: Chain A: I.49, S.51, G.52, E.68, Q.69, G.70 Ligands: BEN.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.52 BEN.3: 1 residues within 4Å: Ligands: BEN.2 1 PLIP interactions: 1 interactions with chain A Water bridges: A:G.52 BEN.4: 4 residues within 4Å: Chain A: K.3, T.14, F.15, D.16 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:K.3, A:K.3, A:T.14 Hydrogen bonds: A:T.14 Water bridges: A:T.14 BEN.5: 2 residues within 4Å: Chain A: D.10 Ligands: BEN.7 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:D.10 Hydrogen bonds: A:D.10 BEN.6: 2 residues within 4Å: Chain A: P.9, H.88 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:P.9, A:H.88 BEN.7: 5 residues within 4Å: Chain A: D.12, I.13, K.30, A.31 Ligands: BEN.5 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.13, A:A.31 Water bridges: A:D.32, A:D.32 BEN.8: 1 residues within 4Å: Chain A: D.91 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kurisu, G. et al., A structural basis of Equisetum arvense ferredoxin isoform II producing an alternative electron transfer with ferredoxin-NADP+ reductase. J.Biol.Chem. (2005)

Release Date

2004-11-02

Peptides

Ferredoxin II: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ferredoxin II