SMTL ID : 1ws1.1

Structure analysis of peptide deformylase from Bacillus cereus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x NI: NICKEL (II) ION(Non-covalent)

NI.1: 5 residues within 4Å: Chain A: Q.51, C.90, H.132, H.136 Ligands: BB2.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.90, A:H.132, A:H.136

1 x BB2: ACTINONIN(Non-covalent)

BB2.2: 18 residues within 4Å: Chain A: D.43, G.44, V.45, G.46, Q.51, P.87, E.88, G.89, C.90, L.91, Y.97, F.125, R.128, A.129, H.132, E.133, H.136 Ligands: NI.1 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:E.88, A:L.91, A:L.91, A:Y.97, A:F.125, A:F.125, A:R.128, A:H.132 Hydrogen bonds: A:V.45, A:G.46, A:Q.51, A:G.89, A:G.89, A:L.91, A:E.133

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moon, J.H. et al., Structure analysis of peptide deformylase from Bacillus cereus. Proteins (2005)

Release Date

2005-09-13

Peptides

Peptide deformylase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptide deformylase 1

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