- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
- 4 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)
AMP.3: 16 residues within 4Å:- Chain A: F.132, N.136, R.140, F.171, T.172, K.173, H.260, K.261
- Chain B: Y.33, Y.37, F.39, Y.147, G.151, G.155, V.156, D.180
13 PLIP interactions:9 interactions with chain A, 4 interactions with chain B- Hydrogen bonds: A:N.136, A:K.173, A:K.173, B:Y.33, B:G.155
- Water bridges: A:R.140, A:R.140, B:Y.33, B:Y.33
- Salt bridges: A:R.140, A:K.261
- pi-Stacking: A:H.260, A:H.260
AMP.4: 15 residues within 4Å:- Chain A: G.46, I.47, S.48, S.53, V.81, R.82, L.83, Q.88, R.142, T.160, E.165, D.176
- Ligands: MG.1, MG.2, DPO.5
14 PLIP interactions:14 interactions with chain A- Hydrogen bonds: A:R.82, A:L.83, A:Q.88, A:Q.88, A:R.142, A:E.165, A:D.176
- Water bridges: A:R.142, A:R.142, A:Q.146, A:T.160, A:T.160, A:T.160, A:E.165
AMP.8: 16 residues within 4Å:- Chain A: Y.33, Y.37, F.39, Y.147, G.151, G.155, V.156, D.180
- Chain B: F.132, N.136, R.140, F.171, T.172, K.173, H.260, K.261
12 PLIP interactions:3 interactions with chain A, 9 interactions with chain B- Hydrogen bonds: A:Y.33, A:Y.33, A:G.155, B:N.136, B:K.173, B:K.173
- Water bridges: B:R.140, B:R.140
- Salt bridges: B:R.140, B:K.261
- pi-Stacking: B:H.260, B:H.260
AMP.9: 15 residues within 4Å:- Chain B: G.46, I.47, S.48, S.53, V.81, R.82, L.83, Q.88, R.142, T.160, E.165, D.176
- Ligands: MG.6, MG.7, DPO.10
12 PLIP interactions:12 interactions with chain B- Hydrogen bonds: B:R.82, B:L.83, B:Q.88, B:Q.88, B:R.142, B:T.160, B:E.165
- Water bridges: B:R.142, B:R.142, B:Q.146, B:T.160, B:T.160
- 2 x DPO: DIPHOSPHATE(Non-covalent)
DPO.5: 10 residues within 4Å:- Chain A: S.48, G.50, Q.51, D.52, S.53, E.165, K.189
- Ligands: MG.1, MG.2, AMP.4
10 PLIP interactions:10 interactions with chain A- Hydrogen bonds: A:S.48, A:S.48, A:Q.51, A:D.52, A:S.53, A:S.53, A:E.165, A:E.165
- Water bridges: A:K.189
- Salt bridges: A:K.189
DPO.10: 10 residues within 4Å:- Chain B: S.48, G.50, Q.51, D.52, S.53, E.165, K.189
- Ligands: MG.6, MG.7, AMP.9
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:S.48, B:S.48, B:Q.51, B:D.52, B:S.53, B:S.53, B:E.165
- Water bridges: B:K.189
- Salt bridges: B:K.189
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jauch, R. et al., Structures of Escherichia coli NAD Synthetase with Substrates and Products Reveal Mechanistic Rearrangements. J.Biol.Chem. (2005)
- Release Date
- 2005-02-15
- Peptides
- NH(3)-dependent NAD(+) synthetase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
- 4 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)
- 2 x DPO: DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jauch, R. et al., Structures of Escherichia coli NAD Synthetase with Substrates and Products Reveal Mechanistic Rearrangements. J.Biol.Chem. (2005)
- Release Date
- 2005-02-15
- Peptides
- NH(3)-dependent NAD(+) synthetase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A