SMTL ID : 1wzi.1

Structural basis for alteration of cofactor specificity of Malate dehydrogenase from Thermus flavus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.1: 17 residues within 4Å: Chain A: G.11, G.14, Q.15, I.16, G.42, S.43, S.46, G.88, A.89, V.129, G.130, N.131, M.155, L.158, H.187, S.236, A.241 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:L.158, A:A.241 Hydrogen bonds: A:G.11, A:Q.15, A:Q.15, A:I.16, A:S.43, A:S.46, A:S.46, A:A.89, A:A.89, A:N.131, A:N.131, A:M.155, A:S.236 Water bridges: A:G.11, A:G.11, A:G.14, A:G.17 NDP.2: 20 residues within 4Å: Chain B: G.11, A.12, A.13, G.14, Q.15, I.16, L.41, G.42, S.43, S.46, G.88, A.89, V.129, G.130, N.131, M.155, L.158, H.187, S.236, A.241 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:L.158, B:A.241 Hydrogen bonds: B:A.13, B:Q.15, B:Q.15, B:I.16, B:S.43, B:S.46, B:N.131, B:N.131, B:M.155, B:S.236 Water bridges: B:G.11, B:G.11, B:G.14, B:G.17

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tomita, T. et al., Structural basis for alteration of cofactor specificity of malate dehydrogenase from Thermus flavus. to be published

Release Date

2006-03-14

Peptides

Malate dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Malate dehydrogenase

Related Entries With Identical Sequence