SMTL ID : 1x0a.1

Crystal Structure of type II malate/lactate dehydrogenase from thermus thermophilus HB8

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

6 x NA: SODIUM ION(Non-functional Binders)

NA.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) NA.2: 1 residues within 4Å: Chain A: D.172 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.172, A:D.172, A:D.172 NA.3: 1 residues within 4Å: Chain A: E.57 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.57, A:E.57 NA.5: 0 residues within 4Å: (No contacts) 2 PLIP interactions: 2 interactions with chain B Water bridges: B:E.57, B:E.57 NA.6: 1 residues within 4Å: Chain B: D.172 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.172, B:D.172 NA.7: 1 residues within 4Å: Chain B: E.57 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.57

2 x FMT: FORMIC ACID(Non-functional Binders)

FMT.4: 7 residues within 4Å: Chain A: L.173, A.174, E.177, S.178, A.179, K.182 Chain B: K.222 6 PLIP interactions: 1 interactions with chain B, 5 interactions with chain A Hydrogen bonds: B:K.222, A:D.172, A:A.174, A:A.179, A:K.182, A:K.182 FMT.8: 7 residues within 4Å: Chain A: K.222 Chain B: L.173, A.174, E.177, S.178, A.179, K.182 6 PLIP interactions: 5 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:D.172, B:A.174, B:A.179, B:K.182, B:K.182, A:K.222

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mizutani, H. et al., Crystal Structure of type II malate/lactate dehydrogenase from thermus thermophilus HB8. To be Published

Release Date

2006-03-07

Peptides

malate/L-lactate dehydrogenase family protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

malate/L-lactate dehydrogenase family protein

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