SMTL ID : 1x3k.1

Crystal structure of a hemoglobin component (TA-V) from Tokunagayusurika akamusi

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.64 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 18 residues within 4Å: Chain A: Y.35, N.42, K.45, F.46, T.48, R.69, I.70, I.73, F.74, M.94, P.97, H.98, R.101, I.103, S.107, Y.108, L.111, F.136 24 PLIP interactions: 23 interactions with chain A, 1 Ligand-Water interactions, Hydrophobic interactions: A:N.42, A:K.45, A:F.46, A:F.46, A:F.46, A:F.46, A:I.70, A:I.73, A:I.73, A:F.74, A:I.103, A:F.136, A:F.136 Hydrogen bonds: A:T.48, A:R.69 Water bridges: A:E.47 Salt bridges: A:R.69, A:H.98, A:R.101 pi-Stacking: A:H.98, A:H.98 pi-Cation interactions: A:R.101 Metal complexes: A:H.98, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kuwada, T. et al., Crystal structures of two hemoglobin components from the midge larva Propsilocerus akamusi (Orthocladiinae, Diptera). Gene (2007)

Release Date

2005-05-24

Peptides

hemoglobin component V: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

hemoglobin component V

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