SMTL ID : 1x46.1

Crystal structure of a hemoglobin component (TA-VII) from Tokunagayusurika akamusi

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 18 residues within 4Å: Chain A: F.33, S.40, K.43, F.44, S.45, H.64, R.67, I.68, V.71, I.72, Q.95, N.98, H.99, R.102, V.104, H.108, F.109, F.112 24 PLIP interactions: 23 interactions with chain A, 1 Ligand-Water interactions Hydrophobic interactions: A:F.33, A:K.43, A:F.44, A:F.44, A:F.44, A:I.68, A:V.71, A:V.71, A:I.72, A:V.104, A:F.112, A:F.112 Hydrogen bonds: A:S.45, A:N.98 Water bridges: A:A.46, A:R.67, A:Q.95, A:R.102, A:R.102 Salt bridges: A:R.102 pi-Stacking: A:H.64, A:H.99 Metal complexes: A:H.99, H2O.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kuwada, T. et al., Crystal structures of two hemoglobin components from the midge larva Propsilocerus akamusi (Orthocladiinae, Diptera). Gene (2007)

Release Date

2005-05-24

Peptides

hemoglobin component VII: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

hemoglobin component VII