SMTL ID : 1x74.2 (1 other biounit)

Alpha-methylacyl-CoA racemase from Mycobacterium tuberculosis- mutational and structural characterization of the fold and active site

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

homo-dimer

Ligands

8 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 10 residues within 4Å: Chain A: P.96, C.99, A.100, N.103, D.104, L.106, Y.108, G.181, Q.182, V.183 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.104, A:L.106 Water bridges: A:G.181 GOL.2: 8 residues within 4Å: Chain A: I.16, H.126, D.127, N.152, D.156 Chain B: L.217, Y.224, I.240 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.126, A:D.127 Water bridges: A:N.152, A:N.152 GOL.3: 4 residues within 4Å: Chain A: A.292, P.300, E.310 Chain B: R.120 No protein-ligand interaction detected (PLIP) GOL.4: 5 residues within 4Å: Chain A: D.48 Chain B: M.198, A.201, M.202, M.207 1 PLIP interactions: 1 interactions with chain A Water bridges: A:A.49 GOL.6: 6 residues within 4Å: Chain B: M.216, Y.223, I.240, P.242, Q.262, N.263 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Y.223, B:N.263 GOL.7: 3 residues within 4Å: Chain B: P.261, N.263, D.264 1 PLIP interactions: 1 interactions with chain B Water bridges: B:N.263 GOL.8: 7 residues within 4Å: Chain A: L.217, I.240 Chain B: G.17, H.126, D.127, N.152, D.156 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:H.126, B:D.127, B:N.152 GOL.9: 10 residues within 4Å: Chain B: P.96, C.99, A.100, N.103, D.104, L.106, Y.108, G.181, Q.182, V.183 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:D.104, B:L.106 Water bridges: B:G.181

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.5: 1 residues within 4Å: Chain B: H.282 3 PLIP interactions: 3 interactions with chain B Water bridges: B:H.282, B:H.282 Salt bridges: B:H.282

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Savolainen, K. et al., {alpha}-Methylacyl-CoA Racemase from Mycobacterium tuberculosis: MUTATIONAL AND STRUCTURAL CHARACTERIZATION OF THE ACTIVE SITE AND THE FOLD. J.Biol.Chem. (2005)

Release Date

2005-01-18

Peptides

2-methylacyl-CoA racemase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

2-methylacyl-CoA racemase

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