SMTL ID : 1x7a.2 (1 other biounit)

Porcine Factor IXa Complexed to 1-{3-[amino(imino)methyl]phenyl}-N-[4-(1H-benzimidazol-1-yl)-2-fluorophenyl]-3-(trifluoromethyl)-1H-pyrazole-5-carboxamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-2-2-mer

Ligands

2 x 187: 1-{3-[AMINO(IMINO)METHYL]PHENYL}-N-[4-(1H-BENZIMIDAZOL-1-YL)-2-FLUOROPHENYL]-3-(TRIFLUOROMETHYL)-1H-PYRAZOLE-5-CARBOXAMIDE(Non-covalent)

187.1: 19 residues within 4Å: Chain A: N.84, Y.86, R.132, R.136, F.162, D.179, S.180, C.181, Q.182, S.185, I.203, S.204, W.205, G.206, E.207, E.208, C.209, G.216, Y.218 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.86, A:Y.86, A:F.162, A:I.203, A:W.205 Hydrogen bonds: A:D.179, A:S.180, A:Q.182, A:G.206, A:E.208 pi-Stacking: A:F.162 Halogen bonds: A:Q.182 187.2: 19 residues within 4Å: Chain C: N.84, Y.86, R.132, R.136, F.162, D.179, S.180, C.181, Q.182, S.185, I.203, S.204, W.205, G.206, E.207, E.208, C.209, G.216, Y.218 12 PLIP interactions: 12 interactions with chain C Hydrophobic interactions: C:Y.86, C:Y.86, C:F.162, C:I.203, C:W.205 Hydrogen bonds: C:D.179, C:S.180, C:Q.182, C:G.206, C:E.208 pi-Stacking: C:F.162 Halogen bonds: C:Q.182

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Smallheer, J.M. et al., SAR and factor IXa crystal structure of a dual inhibitor of factors IXa and Xa. Bioorg.Med.Chem.Lett. (2004)

Release Date

2005-08-16

Peptides

Coagulation Factor IXa: AC
Coagulation Factor IX, light chain: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

C
C

B
L

D
L

Coagulation Factor IXa

Coagulation Factor IX, light chain

Related Entries With Identical Sequence