SMTL ID : 1x7p.1

Crystal structure of the SpoU Methyltransferase AviRb from Streptomyces viridochromogenes in complex with the cofactor AdoMet

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

homo-dimer

Ligands

2 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.1: 20 residues within 4Å: Chain A: T.210, D.211, E.212, I.231, G.232, N.233, E.234, T.235, A.236, G.237, L.238, V.250, S.251, I.252, M.254, S.260, L.261, A.263, A.266 Chain B: R.145 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:T.210, A:T.210, A:G.232, A:L.238, A:I.252, A:I.252, A:L.261 SAM.2: 19 residues within 4Å: Chain A: R.145 Chain B: T.210, D.211, E.212, I.231, G.232, N.233, E.234, T.235, A.236, G.237, L.238, V.250, S.251, I.252, M.254, L.261, A.263, A.266 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:T.210, B:E.212, B:G.232, B:N.233, B:L.238, B:I.252, B:I.252, B:L.261 Water bridges: B:R.243 Salt bridges: B:E.212

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mosbacher, T.G. et al., Structure and function of the antibiotic resistance-mediating methyltransferase AviRb from Streptomyces viridochromogenes. J.Mol.Biol. (2005)

Release Date

2005-01-25

Peptides

rRNA methyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

rRNA methyltransferase

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