- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.72 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 4 x K: POTASSIUM ION(Non-covalent)
- 2 x MN: MANGANESE (II) ION(Non-covalent)
MN.2: 4 residues within 4Å:- Chain A: E.193, N.222, Y.224
- Ligands: TPP.4
4 PLIP interactions:3 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:E.193, A:E.193, A:Y.224, H2O.1
MN.8: 4 residues within 4Å:- Chain C: E.193, N.222, Y.224
- Ligands: TPP.10
4 PLIP interactions:3 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:E.193, C:E.193, C:Y.224, H2O.25
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x TPP: THIAMINE DIPHOSPHATE(Non-covalent)
TPP.4: 22 residues within 4Å:- Chain A: R.114, S.162, P.163, L.164, G.192, E.193, G.194, A.195, E.198, R.220, N.222, Y.224, A.225, I.226, H.291
- Chain D: E.46, L.74, E.76, Q.98, Y.102
- Ligands: MN.2, CL.3
18 PLIP interactions:16 interactions with chain A, 2 interactions with chain D- Hydrophobic interactions: A:L.164, A:A.225, A:I.226, A:I.226, D:Y.102
- Hydrogen bonds: A:S.162, A:G.192, A:E.193, A:G.194, A:A.195
- Water bridges: A:R.114, A:R.220, A:N.222, A:H.291
- Salt bridges: A:R.114, A:R.220, A:H.291
- pi-Stacking: D:Y.102
TPP.10: 22 residues within 4Å:- Chain B: E.46, L.74, E.76, Q.98, Y.102
- Chain C: R.114, S.162, P.163, L.164, G.192, E.193, G.194, A.195, E.198, R.220, N.222, Y.224, A.225, I.226, H.291
- Ligands: MN.8, CL.9
19 PLIP interactions:17 interactions with chain C, 2 interactions with chain B- Hydrophobic interactions: C:L.164, C:A.225, C:I.226, C:I.226, B:Y.102
- Hydrogen bonds: C:S.162, C:G.192, C:E.193, C:G.194, C:A.195, C:E.198, C:N.222
- Water bridges: C:R.114, C:R.220, C:N.222
- Salt bridges: C:R.114, C:R.220, C:H.291
- pi-Stacking: B:Y.102
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.6: 7 residues within 4Å:- Chain A: Q.374
- Chain B: W.260, E.290, T.294
- Chain D: L.283, T.284, R.309
7 PLIP interactions:3 interactions with chain D, 4 interactions with chain B- Hydrogen bonds: D:T.284, D:R.309, B:E.290, B:E.297
- Water bridges: D:D.314, B:W.260, B:E.297
GOL.12: 7 residues within 4Å:- Chain B: L.283, T.284, R.309
- Chain C: Q.374
- Chain D: W.260, E.290, T.294
6 PLIP interactions:3 interactions with chain D, 3 interactions with chain B- Hydrogen bonds: D:T.294, D:E.297, B:T.284, B:T.284, B:R.309
- Water bridges: D:W.260
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wynn, R.M. et al., Molecular mechanism for regulation of the human mitochondrial branched-chain alpha-ketoacid dehydrogenase complex by phosphorylation. Structure (2004)
- Release Date
- 2004-11-23
- Peptides
- 2-oxoisovalerate dehydrogenase alpha subunit: AC
2-oxoisovalerate dehydrogenase beta subunit: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AB
BD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.72 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 4 x K: POTASSIUM ION(Non-covalent)
- 2 x MN: MANGANESE (II) ION(Non-covalent)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x TPP: THIAMINE DIPHOSPHATE(Non-covalent)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wynn, R.M. et al., Molecular mechanism for regulation of the human mitochondrial branched-chain alpha-ketoacid dehydrogenase complex by phosphorylation. Structure (2004)
- Release Date
- 2004-11-23
- Peptides
- 2-oxoisovalerate dehydrogenase alpha subunit: AC
2-oxoisovalerate dehydrogenase beta subunit: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AB
BD
B