SMTL ID : 1xdn.1

High resolution crystal structure of an editosome enzyme from trypanosoma brucei: RNA editing ligase 1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: K.40, E.112 Ligands: ATP.2 No protein-ligand interaction detected (PLIP)

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.2: 16 residues within 4Å: Chain A: Y.11, I.12, E.13, I.14, E.39, K.40, V.41, N.45, R.64, E.112, F.160, F.162, V.239, K.260, R.262 Ligands: MG.1 25 PLIP interactions: 25 interactions with chain A Hydrogen bonds: A:Y.11, A:I.12, A:I.14, A:E.39, A:K.40, A:V.41, A:N.45, A:R.64, A:R.64 Water bridges: A:H.42, A:T.44, A:T.44, A:K.260, A:K.260, A:R.262, A:R.262, A:R.262, A:R.262 Salt bridges: A:K.40, A:K.40, A:R.64, A:K.260, A:R.262, A:R.262 pi-Stacking: A:F.162

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Deng, J. et al., High resolution crystal structure of a key editosome enzyme from Trypanosoma brucei: RNA editing ligase 1. J.Mol.Biol. (2004)

Release Date

2004-12-07

Peptides

RNA editing ligase MP52: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RNA editing ligase MP52