- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x MG: MAGNESIUM ION(Non-covalent)
- 4 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
ATP.3: 15 residues within 4Å:- Chain A: F.16, V.20, I.40, N.44, Y.373, R.374, R.404, H.434, Y.467, R.563, L.589, H.591, R.593
- Ligands: MG.1, MG.2
19 PLIP interactions:19 interactions with chain A- Hydrogen bonds: A:N.44, A:R.52, A:Y.373, A:R.404, A:N.458, A:Y.467, A:Y.467, A:R.593
- Water bridges: A:N.537, A:N.537, A:R.563, A:R.563
- Salt bridges: A:R.374, A:R.374, A:H.434, A:R.563, A:H.591, A:H.591, A:H.591
ATP.6: 16 residues within 4Å:- Chain B: F.16, V.20, I.40, N.44, Y.373, R.374, R.404, H.434, Y.467, R.563, D.586, L.589, H.591, R.593
- Ligands: MG.4, MG.5
14 PLIP interactions:14 interactions with chain B- Hydrogen bonds: B:N.44, B:Y.373, B:R.404, B:N.458, B:Y.467, B:Y.467, B:R.593, B:R.593
- Salt bridges: B:R.374, B:R.374, B:H.434, B:R.563, B:H.591, B:H.591
ATP.9: 15 residues within 4Å:- Chain C: F.16, V.20, I.40, N.44, Y.373, R.374, R.404, H.434, Y.467, R.563, L.589, H.591, R.593
- Ligands: MG.7, MG.8
19 PLIP interactions:19 interactions with chain C- Hydrogen bonds: C:N.44, C:R.52, C:Y.373, C:R.404, C:N.458, C:Y.467, C:Y.467, C:R.593
- Water bridges: C:N.537, C:N.537, C:R.563, C:R.563
- Salt bridges: C:R.374, C:R.374, C:H.434, C:R.563, C:H.591, C:H.591, C:H.591
ATP.12: 16 residues within 4Å:- Chain D: F.16, V.20, I.40, N.44, Y.373, R.374, R.404, H.434, Y.467, R.563, D.586, L.589, H.591, R.593
- Ligands: MG.10, MG.11
14 PLIP interactions:14 interactions with chain D- Hydrogen bonds: D:N.44, D:Y.373, D:R.404, D:N.458, D:Y.467, D:Y.467, D:R.593, D:R.593
- Salt bridges: D:R.374, D:R.374, D:H.434, D:R.563, D:H.591, D:H.591
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zhu, Y. et al., Crystal structure of a polyphosphate kinase and its implications for polyphosphate synthesis. Embo Rep. (2005)
- Release Date
- 2005-06-21
- Peptides
- Polyphosphate kinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x MG: MAGNESIUM ION(Non-covalent)
- 4 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zhu, Y. et al., Crystal structure of a polyphosphate kinase and its implications for polyphosphate synthesis. Embo Rep. (2005)
- Release Date
- 2005-06-21
- Peptides
- Polyphosphate kinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B