SMTL ID : 1xmk.1

The Crystal structure of the Zb domain from the RNA editing enzyme ADAR1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 0.97 Å

Oligo State

monomer

Ligands

2 x CD: CADMIUM ION(Non-covalent)

CD.1: 5 residues within 4Å: Chain A: E.14, C.17, K.72 Ligands: CD.2, CL.4 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.17 CD.2: 4 residues within 4Å: Chain A: E.14, C.17 Ligands: CD.1, CL.5 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.14, A:E.14, A:C.17

1 x NI: NICKEL (II) ION(Non-covalent)

NI.3: 4 residues within 4Å: Chain A: G.1, S.2, H.3, M.9 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.3

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 5 residues within 4Å: Chain A: K.13, C.17, M.50, K.72 Ligands: CD.1 Ligand excluded by PLIP CL.5: 4 residues within 4Å: Chain A: E.14, C.17, M.76 Ligands: CD.2 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Athanasiadis, A. et al., The Crystal Structure of the Z[beta] Domain of the RNA-editing Enzyme ADAR1 Reveals Distinct Conserved Surfaces Among Z-domains. J.Mol.Biol. (2005)

Release Date

2005-08-02

Peptides

Double-stranded RNA-specific adenosine deaminase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Double-stranded RNA-specific adenosine deaminase