SMTL ID : 1xp8.1

Deinococcus radiodurans RecA in complex with ATP-gamma-S

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-hexamer

Ligands

6 x AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER(Non-covalent)

AGS.1: 15 residues within 4Å: Chain A: P.82, E.83, S.84, G.85, G.86, K.87, T.88, T.89, D.115, Y.118, Q.209, K.242, L.278, Y.280, G.281 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:S.84, A:S.84, A:G.85, A:G.86, A:K.87, A:K.87, A:T.88, A:T.88, A:T.89, A:T.89, A:D.115, A:Q.209, A:K.242, A:G.281 Salt bridges: A:K.87 pi-Stacking: A:Y.118, A:Y.118 AGS.2: 15 residues within 4Å: Chain B: P.82, E.83, S.84, G.85, G.86, K.87, T.88, T.89, D.115, Y.118, Q.209, K.242, L.278, Y.280, G.281 17 PLIP interactions: 17 interactions with chain B Hydrogen bonds: B:S.84, B:S.84, B:G.85, B:G.86, B:K.87, B:K.87, B:T.88, B:T.88, B:T.89, B:T.89, B:D.115, B:Q.209, B:K.242, B:G.281 Salt bridges: B:K.87 pi-Stacking: B:Y.118, B:Y.118 AGS.3: 15 residues within 4Å: Chain C: P.82, E.83, S.84, G.85, G.86, K.87, T.88, T.89, D.115, Y.118, Q.209, K.242, L.278, Y.280, G.281 17 PLIP interactions: 17 interactions with chain C Hydrogen bonds: C:S.84, C:S.84, C:G.85, C:G.86, C:K.87, C:K.87, C:T.88, C:T.88, C:T.89, C:T.89, C:D.115, C:Q.209, C:K.242, C:G.281 Salt bridges: C:K.87 pi-Stacking: C:Y.118, C:Y.118 AGS.4: 15 residues within 4Å: Chain D: P.82, E.83, S.84, G.85, G.86, K.87, T.88, T.89, D.115, Y.118, Q.209, K.242, L.278, Y.280, G.281 17 PLIP interactions: 17 interactions with chain D Hydrogen bonds: D:S.84, D:S.84, D:G.85, D:G.86, D:K.87, D:K.87, D:T.88, D:T.88, D:T.89, D:T.89, D:D.115, D:Q.209, D:K.242, D:G.281 Salt bridges: D:K.87 pi-Stacking: D:Y.118, D:Y.118 AGS.5: 15 residues within 4Å: Chain E: P.82, E.83, S.84, G.85, G.86, K.87, T.88, T.89, D.115, Y.118, Q.209, K.242, L.278, Y.280, G.281 17 PLIP interactions: 17 interactions with chain E Hydrogen bonds: E:S.84, E:S.84, E:G.85, E:G.86, E:K.87, E:K.87, E:T.88, E:T.88, E:T.89, E:T.89, E:D.115, E:Q.209, E:K.242, E:G.281 Salt bridges: E:K.87 pi-Stacking: E:Y.118, E:Y.118 AGS.6: 15 residues within 4Å: Chain F: P.82, E.83, S.84, G.85, G.86, K.87, T.88, T.89, D.115, Y.118, Q.209, K.242, L.278, Y.280, G.281 17 PLIP interactions: 17 interactions with chain F Hydrogen bonds: F:S.84, F:S.84, F:G.85, F:G.86, F:K.87, F:K.87, F:T.88, F:T.88, F:T.89, F:T.89, F:D.115, F:Q.209, F:K.242, F:G.281 Salt bridges: F:K.87 pi-Stacking: F:Y.118, F:Y.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rajan, R. et al., Crystal structure of RecA from Deinococcus radiodurans: insights into the structural basis of extreme radioresistance. J.Mol.Biol. (2004)

Release Date

2004-12-21

Peptides

RecA protein: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

RecA protein