Toggle navigation
Modelling
myWorkspace
Alignment Mode
User Template Mode
DeepView Project Mode
Modelling API
Template Library
Repository
SWISS-MODEL Repository
Repository API
3D-Beacons API
Annotation Projects
TBvar3D
Tools
Structure Assessment
Structure Comparison
QMEAN
Documentation
SWISS-MODEL
Examples
Video Tutorial
New Features
SWISS-MODEL Repository
QMEAN
Structure Assessment
Structure Comparison
TBvar3D
Protein Structure Course
References
Log in
Create Account
SMTL ID : 1xpc.1
HUMAN ESTROGEN RECEPTOR ALPHA LIGAND-BINDING DOMAIN IN COMPLEX WITH COMPOUND 19
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 1.60 Å
Oligo State
homo-dimer
Ligands
2 x
AIT
:
(2S,3R)-3-(4-HYDROXYPHENYL)-2-(4-{[(2R)-2-PYRROLIDIN-1-YLPROPYL]OXY}PHENYL)-2,3-DIHYDRO-1,4-BENZOXATHIIN-6-OL
(Non-covalent)
AIT.1:
21 residues within 4Å:
Chain A:
L.40
,
T.41
,
L.43
,
A.44
,
D.45
,
E.47
,
L.48
,
W.77
,
L.78
,
L.81
,
M.82
,
L.85
,
R.88
,
F.98
,
M.115
,
I.118
,
G.215
,
H.218
,
L.219
,
C.224
,
K.225
17
PLIP interactions
:
17 interactions with chain A
Hydrophobic interactions:
A:T.41
,
A:L.43
,
A:A.44
,
A:L.48
,
A:W.77
,
A:L.78
,
A:L.85
,
A:F.98
,
A:L.219
,
A:L.219
,
A:K.225
Hydrogen bonds:
A:E.47
,
A:R.88
,
A:G.215
,
A:L.219
Water bridges:
A:R.88
Salt bridges:
A:D.45
AIT.2:
21 residues within 4Å:
Chain B:
L.40
,
T.41
,
L.43
,
A.44
,
D.45
,
E.47
,
L.48
,
W.77
,
L.78
,
L.81
,
M.82
,
L.85
,
R.88
,
F.98
,
M.115
,
I.118
,
G.215
,
H.218
,
L.219
,
C.224
,
K.225
18
PLIP interactions
:
18 interactions with chain B
Hydrophobic interactions:
B:T.41
,
B:L.43
,
B:A.44
,
B:L.48
,
B:W.77
,
B:L.78
,
B:L.85
,
B:F.98
,
B:L.219
,
B:L.219
,
B:K.225
Hydrogen bonds:
B:E.47
,
B:R.88
,
B:G.215
,
B:H.218
,
B:L.219
Water bridges:
B:R.88
Salt bridges:
B:D.45
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Blizzard, T.A. et al., Estrogen receptor ligands. Part 9: Dihydrobenzoxathiin SERAMs with alkyl substituted pyrrolidine side chains and linkers. Bioorg.Med.Chem.Lett. (2005)
Release Date
2004-12-07
Peptides
Estrogen receptor:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
A
Export Alignment
FASTA format
Clustal Format
PNG Image
Secondary Structure
None
DSSP
PSIPRED
SSpro
Colour Scheme
Fade Mismatches
Enhance Mismatches
Chain
Unique Chain
Rainbow
2° Structure
Bfactor
Bfactor Range
SOA
Entropy
Clustal
Hydrophobic
Size
Charged
Polar
Proline
Ser/Thr
Cysteine
Aliphatic
Aromatic
No Colour
Background
3D Viewer
NGL
PV
2D
FASTA
Multi FASTA
ClustalW
PNG
Estrogen receptor
Toggle Identical (AB)
Related Entries With Identical Sequence
1sj0.1
|
1xp1.1
|
1xp6.1
|
1xp9.1
|
1yim.1
|
1yin.1
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
Low
Medium
High
Extreme