SMTL ID : 1xpm.1 (1 other biounit)

Crystal Structure of Staphylococcus aureus HMG-COA Synthase with HMG-CoA and Acetoacetyl-COA and Acetylated Cysteine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: G.190, H.191, K.192, Y.193 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.192, A:Y.193 Water bridges: A:G.190, A:H.191 Salt bridges: A:H.191 SO4.2: 2 residues within 4Å: Chain A: S.147, G.148 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.148 Water bridges: A:G.149 SO4.5: 4 residues within 4Å: Chain B: G.190, H.191, K.192, Y.193 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.190, B:K.192, B:Y.193 Water bridges: B:H.191 Salt bridges: B:H.191 SO4.6: 2 residues within 4Å: Chain B: S.147, G.148 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:G.148 Water bridges: B:S.147, B:G.149

2 x HMG: 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A(Covalent)

HMG.3: 27 residues within 4Å: Chain A: D.29, N.31, K.32, G.36, E.79, A.110, C.111, Y.143, G.148, G.149, T.152, F.185, V.196, G.198, S.201, K.202, Y.205, H.233, P.235, F.236, M.239, N.275, Y.277, Y.305, G.306, S.307 Ligands: CAA.4 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:F.185, A:V.196, A:F.236, A:Y.305 Hydrogen bonds: A:D.29, A:E.79, A:S.201, A:S.201, A:N.275, A:S.307 Water bridges: A:N.31, A:Y.143, A:G.148 Salt bridges: A:K.32, A:K.32, A:K.238 HMG.7: 25 residues within 4Å: Chain B: D.29, N.31, K.32, G.36, E.79, A.110, C.111, Y.143, G.148, G.149, T.152, F.185, G.198, S.201, Y.205, H.233, P.235, F.236, M.239, K.242, N.275, Y.305, G.306, S.307 Ligands: CAA.8 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:F.185, B:F.236, B:Y.305 Hydrogen bonds: B:D.29, B:E.79, B:S.201, B:N.275, B:S.307 Water bridges: B:N.31, B:N.31, B:N.31, B:T.152, B:K.242 Salt bridges: B:K.242

2 x CAA: ACETOACETYL-COENZYME A(Non-covalent)

CAA.4: 23 residues within 4Å: Chain A: D.29, N.31, K.32, G.36, C.111, Y.143, G.148, G.149, T.152, F.185, V.196, G.198, S.201, Y.205, H.233, P.235, F.236, M.239, N.275, Y.277, Y.305, S.307 Ligands: HMG.3 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:F.185, A:V.196, A:F.236 Hydrogen bonds: A:D.29, A:T.152, A:S.201, A:S.201, A:N.275 Water bridges: A:N.31, A:G.148 Salt bridges: A:K.32, A:K.32, A:K.238 CAA.8: 21 residues within 4Å: Chain B: D.29, N.31, K.32, G.36, C.111, Y.143, G.148, G.149, T.152, F.185, G.198, S.201, Y.205, H.233, P.235, F.236, K.242, N.275, Y.305, S.307 Ligands: HMG.7 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:F.185, B:F.236 Hydrogen bonds: B:D.29, B:S.201, B:N.275 Water bridges: B:N.31, B:N.31, B:T.152, B:K.242 Salt bridges: B:K.242

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Theisen, M.J. et al., 3-hydroxy-3-methylglutaryl-CoA synthase intermediate complex observed in "real-time. Proc.Natl.Acad.Sci.USA (2004)

Release Date

2004-11-02

Peptides

3-hydroxy-3-methylglutaryl CoA synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

3-hydroxy-3-methylglutaryl CoA synthase

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