SMTL ID : 1xq5.1

Met-Perch Hemoglobin at 1.9A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-2-2-mer

Ligands

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 16 residues within 4Å: Chain A: Y.43, F.44, W.47, H.60, T.63, I.64, I.68, L.85, L.88, H.89, L.93, V.95, N.99, F.100, L.103, L.138 17 PLIP interactions: 16 interactions with chain A, 1 Ligand-Water interactions Hydrophobic interactions: A:Y.43, A:F.44, A:F.44, A:T.63, A:I.68, A:L.85, A:L.88, A:L.93, A:L.93, A:V.95, A:V.95, A:L.138 Hydrogen bonds: A:W.47 Salt bridges: A:H.46 pi-Stacking: A:H.60 Metal complexes: A:H.89, H2O.2 HEM.2: 17 residues within 4Å: Chain B: T.38, Y.41, F.42, H.63, T.66, I.67, L.71, Y.85, L.88, L.91, H.92, L.96, V.98, N.102, F.103, L.106, L.141 16 PLIP interactions: 15 interactions with chain B, 1 Ligand-Water interactions Hydrophobic interactions: B:Y.41, B:Y.41, B:F.42, B:F.42, B:T.66, B:L.71, B:L.88, B:L.91, B:L.96, B:V.98, B:F.103, B:L.106, B:L.141 pi-Stacking: B:H.63 Metal complexes: B:H.92, H2O.4 HEM.3: 18 residues within 4Å: Chain C: M.33, T.40, Y.43, F.44, H.46, H.60, T.63, I.64, I.68, L.85, L.88, H.89, L.93, V.95, N.99, F.100, L.103, L.138 19 PLIP interactions: 18 interactions with chain C, 1 Ligand-Water interactions Hydrophobic interactions: C:T.40, C:Y.43, C:Y.43, C:F.44, C:F.44, C:T.63, C:I.68, C:L.85, C:L.88, C:L.93, C:L.93, C:V.95, C:V.95, C:L.103, C:L.138 Salt bridges: C:H.46 pi-Cation interactions: C:H.89 Metal complexes: C:H.89, H2O.6 HEM.4: 16 residues within 4Å: Chain D: Y.41, F.42, H.63, T.66, I.67, L.71, Y.85, L.88, L.91, H.92, L.96, V.98, N.102, F.103, L.106, L.141 19 PLIP interactions: 19 interactions with chain D, Hydrophobic interactions: D:Y.41, D:Y.41, D:F.42, D:F.42, D:F.42, D:T.66, D:I.67, D:L.71, D:L.88, D:L.96, D:V.98, D:N.102, D:F.103, D:L.106, D:L.141 Water bridges: D:K.62, D:H.63 pi-Stacking: D:H.63 Metal complexes: D:H.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Center for Eukaryotic Structural Genomics (CESG), Met-Perch Hemoglobin at 1.9A. To be Published

Release Date

2004-11-16

Peptides

Hemoglobin alpha-1 chain: AC
Hemoglobin beta-2 chain: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

Hemoglobin alpha-1 chain

Hemoglobin beta-2 chain

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