SMTL ID : 1xqd.1

Crystal structure of P450NOR complexed with 3-pyridinealdehyde adenine dinucleotide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 28 residues within 4Å: Chain A: K.62, F.86, V.87, H.94, R.98, F.105, I.153, L.235, L.236, A.239, G.240, T.243, M.244, M.247, A.289, I.290, R.292, N.315, G.344, F.345, G.346, D.349, H.350, C.352, I.353, A.354, A.358 Ligands: DND.2 21 PLIP interactions: 21 interactions with chain A, Hydrophobic interactions: A:F.86, A:F.86, A:V.87, A:F.105, A:I.153, A:L.235, A:L.236, A:T.243, A:F.345, A:F.345, A:I.353, A:A.354, A:A.358 Hydrogen bonds: A:A.289 Water bridges: A:K.62 Salt bridges: A:K.62, A:H.94, A:R.98, A:R.292, A:H.350 Metal complexes: A:C.352

1 x DND: NICOTINIC ACID ADENINE DINUCLEOTIDE(Non-covalent)

DND.2: 19 residues within 4Å: Chain A: R.64, G.75, G.76, Q.78, A.79, V.87, R.174, T.175, A.184, S.185, N.188, L.235, V.238, A.239, G.240, T.243, S.286, A.289 Ligands: HEM.1 28 PLIP interactions: 28 interactions with chain A Hydrophobic interactions: A:A.289 Hydrogen bonds: A:R.64, A:R.174, A:N.188, A:G.240, A:T.243 Water bridges: A:K.62, A:K.62, A:K.62, A:R.64, A:R.64, A:G.73, A:G.76, A:G.76, A:N.171, A:R.174, A:S.185, A:S.185, A:T.243, A:A.289, A:K.291, A:K.291, A:K.291, A:K.291, A:K.291 Salt bridges: A:R.64, A:R.174, A:R.174

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oshima, R. et al., Structural evidence for direct hydride transfer from NADH to cytochrome P450nor. J.Mol.Biol. (2004)

Release Date

2004-10-26

Peptides

CYTOCHROME P450 55A1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CYTOCHROME P450 55A1