SMTL ID : 1xss.1

Semi-rational engineering of a green-emitting coral fluorescent protein into an efficient highlighter.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: V.138, H.201, Y.205 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:Y.205, H2O.3, H2O.3, H2O.6, H2O.6 MG.3: 2 residues within 4Å: Chain B: H.201, Y.205 6 PLIP interactions: 1 interactions with chain B, 5 Ligand-Water interactions Metal complexes: B:Y.205, H2O.14, H2O.14, H2O.15, H2O.17, H2O.18

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 4 residues within 4Å: Chain A: I.73, V.74, P.187, D.188 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.74, A:D.188, A:D.188 NA.4: 4 residues within 4Å: Chain B: I.73, V.74, P.187, D.188 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:V.74, B:D.188, B:D.188 Water bridges: B:D.188

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tsutsui, H. et al., Semi-rational engineering of a coral fluorescent protein into an efficient highlighter. Embo Rep. (2005)

Release Date

2005-03-15

Peptides

fluorescent protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

fluorescent protein