SMTL ID : 1y1h.1

human formylglycine generating enzyme, oxidised Cys refined as hydroperoxide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.67 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: T.62, E.65, K.66, N.69 No protein-ligand interaction detected (PLIP)

2 x SR: STRONTIUM ION(Non-functional Binders)

SR.2: 6 residues within 4Å: Chain A: E.58, N.221, I.222, G.224, A.226, E.228 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.58, A:N.221, A:G.224, A:A.226, A:E.228 SR.3: 5 residues within 4Å: Chain A: N.187, I.188, Q.190, D.201, F.203 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:I.188, A:D.201, A:F.203, H2O.1, H2O.1

1 x PEO: HYDROGEN PEROXIDE(Non-functional Binders)

PEO.4: 6 residues within 4Å: Chain A: W.227, G.260, S.261, C.264, C.269, N.288 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.227, A:S.261, A:N.288

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dierks, T. et al., Molecular basis for multiple sulfatase deficiency and mechanism for formylglycine generation of the human formylglycine-generating enzyme. Cell(Cambridge,Mass.) (2005)

Release Date

2005-05-31

Peptides

C-alpha-formyglycine-generating enzyme: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

C-alpha-formyglycine-generating enzyme

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