- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 8 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)GOL.3: 6 residues within 4Å:- Chain A: H.226, A.227, L.228
- Chain C: F.204, K.296, F.297
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:A.227
GOL.6: 3 residues within 4Å:- Chain A: G.207
- Chain B: R.231
- Ligands: GOL.13
5 PLIP interactions:2 interactions with chain B, 2 interactions with chain C, 1 interactions with chain A- Hydrogen bonds: B:R.231, B:R.231, C:A.206
- Water bridges: C:G.230, A:G.207
GOL.7: 5 residues within 4Å:- Chain B: H.226, A.227, L.228
- Chain D: F.297, R.298
4 PLIP interactions:1 interactions with chain B, 3 interactions with chain D- Hydrogen bonds: B:H.226, D:R.298
- Water bridges: D:R.298, D:R.298
GOL.9: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)GOL.10: 6 residues within 4Å:- Chain A: F.204, K.296, F.297
- Chain C: H.226, A.227, L.228
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:A.227
GOL.13: 3 residues within 4Å:- Chain C: G.207
- Chain D: R.231
- Ligands: GOL.6
5 PLIP interactions:1 interactions with chain C, 2 interactions with chain A, 2 interactions with chain D- Water bridges: C:G.207, A:G.230
- Hydrogen bonds: A:A.206, D:R.231, D:R.231
GOL.14: 5 residues within 4Å:- Chain B: F.297, R.298
- Chain D: H.226, A.227, L.228
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain D- Hydrogen bonds: B:R.298, D:H.226
- Water bridges: B:R.298, B:R.298
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 4 residues within 4Å:- Chain B: L.228, F.229, G.230, R.231
4 PLIP interactions:1 interactions with chain C, 3 interactions with chain B- Hydrogen bonds: C:R.231, B:G.230, B:R.231
- Salt bridges: B:R.231
SO4.11: 4 residues within 4Å:- Chain D: L.228, F.229, G.230, R.231
4 PLIP interactions:1 interactions with chain A, 3 interactions with chain D- Hydrogen bonds: A:R.231, D:G.230, D:R.231
- Salt bridges: D:R.231
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mori, S. et al., NAD-binding mode and the significance of intersubunit contact revealed by the crystal structure of Mycobacterium tuberculosis NAD kinase-NAD complex. Biochem.Biophys.Res.Commun. (2005)
- Release Date
- 2005-01-18
- Peptides
- Inorganic polyphosphate/ATP-NAD kinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 8 x GOL: GLYCEROL(Non-functional Binders)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mori, S. et al., NAD-binding mode and the significance of intersubunit contact revealed by the crystal structure of Mycobacterium tuberculosis NAD kinase-NAD complex. Biochem.Biophys.Res.Commun. (2005)
- Release Date
- 2005-01-18
- Peptides
- Inorganic polyphosphate/ATP-NAD kinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B